{
  "_id": "6a1f06e7b401979e7341bd29",
  "Package": "RadOnc",
  "Type": "Package",
  "Title": "Analytical Tools for Radiation Oncology",
  "Version": "1.1.9",
  "Date": "2025-01-21",
  "Authors@R": "person(given = c(\"Reid\", \"F.\"),\nfamily = \"Thompson\",\nrole = c(\"aut\", \"cre\"),\nemail = \"reid.thompson@gmail.com\")",
  "Description": "Designed for the import, analysis, and visualization of\ndosimetric and volumetric data in Radiation Oncology, the tools\nherein enable import of dose-volume histogram information from\nmultiple treatment planning system platforms and 3D structural\nrepresentations and dosimetric information from 'DICOM-RT'\nfiles.  These tools also enable subsequent visualization and\nstatistical analysis of these data.",
  "License": "GPL (>= 2)",
  "LazyData": "yes",
  "LazyLoad": "yes",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-18 06:57:10 UTC",
    "User": "root"
  },
  "Author": "Reid F. Thompson [aut, cre]",
  "Maintainer": "Reid F. Thompson <reid.thompson@gmail.com>",
  "Repository": "https://reidt03.r-universe.dev",
  "Date/Publication": "2025-01-22 05:20:02 UTC",
  "RemoteUrl": "https://github.com/cran/RadOnc",
  "RemoteRef": "HEAD",
  "RemoteSha": "a9fe57bf5f5d9fa642d52807a32b0655135a0760",
  "MD5sum": "be6b04fbd99f3d98a064c53602635ae7",
  "_user": "reidt03",
  "_type": "src",
  "_file": "RadOnc_1.1.9.tar.gz",
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  "_created": "2026-05-18T06:57:10.000Z",
  "_published": "2026-06-02T16:37:59.235Z",
  "_distro": "noble",
  "_jobs": [
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  "_buildurl": "https://github.com/r-universe/reidt03/actions/runs/26018267223",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/RadOnc",
  "_commit": {
    "id": "a9fe57bf5f5d9fa642d52807a32b0655135a0760",
    "author": "Reid F. Thompson <reid.thompson@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.1.9\n",
    "time": 1737523202
  },
  "_maintainer": {
    "name": "Reid F. Thompson",
    "email": "reid.thompson@gmail.com",
    "login": "reidt03",
    "description": "",
    "uuid": 21960505
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.0.0",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Depends"
    },
    {
      "package": "grDevices",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Depends"
    },
    {
      "package": "oro.dicom",
      "version": ">= 0.5.0",
      "role": "Depends"
    },
    {
      "package": "ptinpoly",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 8,
  "_contributors": [
    {
      "user": "reidt03",
      "count": 20,
      "uuid": 21960505
    }
  ],
  "_userbio": {
    "uuid": 21960505,
    "type": "user",
    "name": "Reid Thompson"
  },
  "_downloads": {
    "count": 218,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/RadOnc"
  },
  "_mentions": 4,
  "_searchresults": 19,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/RadOnc.html",
    "manual.pdf"
  ],
  "_realowner": "reidt03",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2013-07-07"
    },
    {
      "version": "1.0.1",
      "date": "2013-10-22"
    },
    {
      "version": "1.0.2",
      "date": "2013-11-25"
    },
    {
      "version": "1.0.3",
      "date": "2014-01-17"
    },
    {
      "version": "1.0.4",
      "date": "2014-01-31"
    },
    {
      "version": "1.0.5",
      "date": "2014-02-19"
    },
    {
      "version": "1.0.6",
      "date": "2014-02-20"
    },
    {
      "version": "1.0.7",
      "date": "2014-02-27"
    },
    {
      "version": "1.0.8",
      "date": "2014-05-31"
    },
    {
      "version": "1.0.9",
      "date": "2014-11-21"
    },
    {
      "version": "1.1.0",
      "date": "2015-04-22"
    },
    {
      "version": "1.1.1",
      "date": "2016-01-24"
    },
    {
      "version": "1.1.2",
      "date": "2017-01-30"
    },
    {
      "version": "1.1.3",
      "date": "2017-03-28"
    },
    {
      "version": "1.1.4",
      "date": "2017-11-07"
    },
    {
      "version": "1.1.5",
      "date": "2019-03-20"
    },
    {
      "version": "1.1.6",
      "date": "2022-05-19"
    },
    {
      "version": "1.1.7",
      "date": "2022-07-20"
    },
    {
      "version": "1.1.8",
      "date": "2022-10-04"
    },
    {
      "version": "1.1.9",
      "date": "2025-01-22"
    }
  ],
  "_exports": [
    "as.list",
    "calculate.DVH",
    "compareStructures",
    "get.HU",
    "gEUD",
    "lapply",
    "LQE",
    "mad",
    "mean",
    "median",
    "plot",
    "print",
    "quantile",
    "read.DICOM.RT",
    "read.DVH",
    "rev",
    "sd",
    "show",
    "subset",
    "t.test",
    "var",
    "wilcox.test"
  ],
  "_datasets": [
    {
      "name": "cord",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "structure3D"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "janedoe",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "DVH.list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "janedoe.RTdata",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "RTdata"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "johndoe",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "DVH.list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "mandible",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "structure3D"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "stomach",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "zDVH"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "teeth",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "object": "RadOnc",
      "class": [
        "structure.list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "RadOnc-package",
      "title": "Analytical Tools for Radiation Oncology",
      "topics": [
        "RadOnc-package",
        "RadOnc"
      ]
    },
    {
      "page": "calculate.DVH",
      "title": "Calculate DVH data for one or more structure(s) using a dose grid",
      "topics": [
        "calculate.DVH",
        "calculate.DVH,ANY,ANY-method",
        "calculate.DVH,ANY,array-method",
        "calculate.DVH,ANY,missing-method",
        "calculate.DVH,RTdata,array-method",
        "calculate.DVH,RTdata,missing-method",
        "calculate.DVH,structure.list,array-method",
        "calculate.DVH,structure3D,array-method",
        "calculate.DVH-methods"
      ]
    },
    {
      "page": "compareStructures",
      "title": "Compare Axially-Defined Three-Dimensional Structures",
      "topics": [
        "compareStructures",
        "compareStructures.axial",
        "compareStructures.EMD",
        "compareStructures.grid",
        "compareStructures.hausdorff",
        "compareStructures.surface"
      ]
    },
    {
      "page": "DVH-class",
      "title": "Class '\"DVH\"'",
      "topics": [
        "$,DVH-method",
        "$<-,DVH-method",
        "c,DVH-method",
        "DVH",
        "DVH-class",
        "initialize,DVH-method",
        "lines,DVH-method",
        "max,DVH-method",
        "mean,DVH-method",
        "min,DVH-method",
        "names,DVH-method",
        "names<-,DVH-method",
        "plot,DVH-method",
        "points,DVH-method",
        "print,DVH-method",
        "range,DVH-method",
        "show,DVH-method",
        "sum,DVH-method",
        "[,DVH-method"
      ]
    },
    {
      "page": "DVH.list-class",
      "title": "Class '\"DVH.list\"'",
      "topics": [
        "$,DVH.list-method",
        "as.list,DVH.list-method",
        "c,DVH.list-method",
        "DVH.list",
        "DVH.list-class",
        "initialize,DVH.list-method",
        "lapply,DVH.list-method",
        "length,DVH.list-method",
        "mad,DVH.list-method",
        "max,DVH.list-method",
        "mean,DVH.list-method",
        "median,DVH.list-method",
        "min,DVH.list-method",
        "names,DVH.list-method",
        "names<-,DVH.list-method",
        "plot,DVH.list-method",
        "print,DVH.list-method",
        "quantile,DVH.list-method",
        "range,DVH.list-method",
        "rev,DVH.list-method",
        "sd,DVH.list-method",
        "show,DVH.list-method",
        "sum,DVH.list-method",
        "t.test,DVH.list-method",
        "var,DVH.list-method",
        "wilcox.test,DVH.list-method",
        "[,DVH.list-method",
        "[[,DVH.list-method",
        "[[<-,DVH.list-method"
      ]
    },
    {
      "page": "get.HU",
      "title": "Extract Hounsfield Unit (HU) data for one or more structure(s) from a CT image",
      "topics": [
        "get.HU",
        "get.HU,ANY,ANY-method",
        "get.HU,ANY,array-method",
        "get.HU,ANY,missing-method",
        "get.HU,list,array-method",
        "get.HU,RTdata,missing-method",
        "get.HU,structure.list,array-method",
        "get.HU,structure3D,array-method",
        "get.HU-methods"
      ]
    },
    {
      "page": "gEUD",
      "title": "Generalized Equivalent Uniform Dose (gEUD) Calculation",
      "topics": [
        "gEUD",
        "gEUD,ANY,missing-method",
        "gEUD,DVH,numeric-method",
        "gEUD,DVH.list,numeric-method",
        "gEUD-methods"
      ]
    },
    {
      "page": "LQE",
      "title": "Linear Quadratic Extrapolated (LQE) Dose Conversion",
      "topics": [
        "LQE",
        "LQE,ANY,missing-method",
        "LQE,DVH,numeric-method",
        "LQE,DVH.list,numeric-method",
        "LQE,numeric,numeric-method",
        "LQE-methods"
      ]
    },
    {
      "page": "plot-methods",
      "title": "Additional Methods for Function 'plot' in Package 'graphics'",
      "topics": [
        "plot,ANY,ANY-method",
        "plot,DVH,ANY-method",
        "plot,DVH,DVH-method",
        "plot,DVH,missing-method",
        "plot,DVH,zDVH-method",
        "plot,DVH.list,ANY-method",
        "plot,DVH.list,missing-method",
        "plot,zDVH,ANY-method",
        "plot,zDVH,DVH-method",
        "plot,zDVH,missing-method",
        "plot,zDVH,zDVH-method",
        "plot-methods",
        "plot.DVH",
        "plot.DVH.list",
        "plot.zDVH"
      ]
    },
    {
      "page": "RadOnc",
      "title": "DVH data for 'John Doe' and 'Jane Doe'; 3D structural data for 'cord', 'mandible', and 'teeth'; RT data for 'Jane Doe'; and a zDVH object for 'stomach'",
      "topics": [
        "cord",
        "janedoe",
        "janedoe.RTdata",
        "johndoe",
        "mandible",
        "RadOnc-data",
        "stomach",
        "teeth"
      ]
    },
    {
      "page": "read.DICOM.RT",
      "title": "Read DICOM-RT data from an input directory",
      "topics": [
        "read.DICOM.RT"
      ]
    },
    {
      "page": "read.DVH",
      "title": "Read DVH data from input file",
      "topics": [
        "read.DVH"
      ]
    },
    {
      "page": "RTdata-class",
      "title": "Class '\"RTdata\"'",
      "topics": [
        "$,RTdata-method",
        "$<-,RTdata-method",
        "names,RTdata-method",
        "names<-,RTdata-method",
        "print,RTdata-method",
        "RTdata-class",
        "show,RTdata-method"
      ]
    },
    {
      "page": "structure.list-class",
      "title": "Class '\"structure.list\"'",
      "topics": [
        "$,structure.list-method",
        "as.list,structure.list-method",
        "c,structure.list-method",
        "initialize,structure.list-method",
        "lapply,structure.list-method",
        "length,structure.list-method",
        "names,structure.list-method",
        "names<-,structure.list-method",
        "print,structure.list-method",
        "range,structure.list-method",
        "rev,structure.list-method",
        "show,structure.list-method",
        "structure.list-class",
        "[,structure.list-method",
        "[[,structure.list-method",
        "[[<-,structure.list-method"
      ]
    },
    {
      "page": "structure3D-class",
      "title": "Class '\"structure3D\"'",
      "topics": [
        "$,structure3D-method",
        "$<-,structure3D-method",
        "c,structure3D-method",
        "dim,structure3D-method",
        "names,structure3D-method",
        "names<-,structure3D-method",
        "print,structure3D-method",
        "range,structure3D-method",
        "show,structure3D-method",
        "structure3D-class"
      ]
    },
    {
      "page": "subset",
      "title": "Extract a subset of a larger DVH list",
      "topics": [
        "subset,DVH-method",
        "subset,DVH.list-method",
        "subset-methods",
        "subset.DVH.list"
      ]
    },
    {
      "page": "zDVH-class",
      "title": "Class '\"zDVH\"'",
      "topics": [
        "$,zDVH-method",
        "$<-,zDVH-method",
        "c,zDVH-method",
        "initialize,zDVH-method",
        "max,zDVH-method",
        "mean,zDVH-method",
        "min,zDVH-method",
        "names,zDVH-method",
        "names<-,zDVH-method",
        "print,zDVH-method",
        "show,zDVH-method",
        "zDVH",
        "zDVH-class",
        "[,zDVH-method"
      ]
    }
  ],
  "_rundeps": [
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    "bitops",
    "misc3d",
    "oro.dicom",
    "oro.nifti",
    "ptinpoly",
    "Rcpp",
    "RNifti"
  ],
  "_vignettes": [
    {
      "source": "RadOnc.Rnw",
      "filename": "RadOnc.pdf",
      "title": "Documentation",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2013-07-07 18:03:29",
      "modified": "2022-05-19 05:50:11",
      "commits": 15
    }
  ],
  "_score": 3.783903579272735,
  "_indexed": true,
  "_nocasepkg": "radonc",
  "_universes": [
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  ],
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